Identifies markers that are used for cluster analysis by FindVariableFeatures

findVarMarkers(seu, avoidMarkers, nFeatures = 10L, ...)

Arguments

seu

A Seurat object

avoidMarkers

The antibody markers should be avoid. eg avoidMarkers = c('sox9', 'hist3h2a').

nFeatures

Number of features to select as top variable features; only used when selection.method is set to 'dispersion' or 'vst'. See FindVariableFeatures.

...

other parameters used by FindVariableFeatures.

Value

A Seurat object

Examples

# example code