Do normalization

Do normalization for the Seurat object created by createSeuratObj

normData(
  seu,
  normalizationMethod = c("LogNormalize", "CLR", "RC", "zscore"),
  ...
)

Arguments

seu

A Seurat object

normalizationMethod

Normalization method for data table. Available methods are 'LogNormalize', 'CLR' (centered log ratio), 'RC' (CPM), 'zscore'.

...

Parameters can be used by NormalizeData

Value

A Seurat object