Table of Contents

FASTQC module
- params.options
- labels
- input
- output

FASTQC module

params.options

publish_dir, publish directory, default 'fastqc'
publish_mode, publish mode, default 'copy'
publish_enabled, publish enabled, default true
args, arguments for fastqc, default '--quite'

labels

process_medium

input

tuple val(meta), path(reads); meta must contain keys id and single_end

output

tuple val(meta), path("*.html"), emit: html
tuple val(meta), path("*.zip"), emit: zip
path "fastqc.version.txt", emit: version