Package index • orthoRibbon

All functions
`addGeneInfo()`	Add gene information to homolog data.frame
`add_coord()`	Add gene coordinates to homolog data
`buildBezierDF()`	Build the data.frame for Bezier curve
`buildChromDF()`	Build chromosome plotting dataframes
`buildHomologLinksDF()`	Build the homolog links dataframe
`buildPlotData()`	Build the plot data
`filterChrom()`	Filter chromosomes
`getChrOrders()`	Get the best order of the chromosomes
`getGeneGRs()`	Retrieve all the gene ranges
`getGeneIDs()`	Retrieve all the ensembl gene IDs by given species abbreviations
`getHomologGRs()`	Retrieve the homolog pairs
`getHomologIDs()`	Retrieve the homolog pairs
`get_unique_max_rows()`	Assign each column to its best row, ensuring no duplicate rows Greedy approach: process columns by their max value (highest first)
`orthoRibbonPlot()`	Plot the data
`subsetHomologsByChrom()`	Filter the homolog data.frame by chromosome names

Reference