Import Tensor-FLAMINGO output to a GRangesList Object
importTensorFLAMINGO(filenames, binsize, chr)
Arguments
- filenames
Vector of character. The file names of output of Tensor-FLAMINGO.
- binsize
Bin size of the interaction. It will be the width of
GRanges.
- chr
Chromosome name
Value
An object of GRangesList
Examples
cells <- 1:3
gm12878 <- paste0('https://github.com/wangjr03/Tensor-FLAMINGO/raw/refs/',
'heads/main/predictions/10kb/GM12878_Dip-C/FLAMINGO_Cell_',
cells, '.txt')
names(gm12878) <- cells
gm12878.gl <- importTensorFLAMINGO(gm12878, binsize=10000, chr='chr21')