plot ideogram

plot ideogram for one chromosome

plotIdeo(
  ideo,
  chrom = seqlevels(ideo)[1],
  colorSheme = gieStain(),
  gp = gpar(fill = NA),
  ...
)

Arguments

ideo

output of loadIdeogram.

chrom

A length 1 character vector of chromosome name.

colorSheme

A character vector of giemsa stain colors.

gp

parameters used for grid.roundrect.

...

parameters not used.

Examples

if (FALSE) { # \dontrun{
ideo <- loadIdeogram("hg38")
library(grid)
grid.newpage()
plotIdeo(ideo)
} # }